Developed
by: Dimitris and Tulio de Oliveira, at Rega Institute,
Belgium.
version 1.0, 16/03/2002, updated Sept. 2004
GDE for Linux menu download:
Contents: HBV Sequence datasets, HBV Sequence
databases, Bioinformatics software, References and Online resources
HBV Sequence datasets
1. Reference sequence :
HPBADRA Hepatitis B virus, complete genome, DNA, 3215 bp
FASTA file, GenBank file, Ref
Seq. NCBI, Genome
picture.
Genome picture:
Figure
of the HBV genome
2. Genetic variants dataset:
FASTA file ,
details (24 complete genome strains)
3. Dataset for phylogenetic analysis:
complete genome - FASTA file
, details (24 complete genome strains).
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Sequence Databases for
local blast and Xylem access:
1. Genbank database (strains, date, where, size)
HBV
Sequence download at HBV Sequence Db (Japan)
Bioinformatics Software:
A large number of software had been integrated, list of the software
The software need to be installed in your system following the instructions.
[PDF file]
Online Resources:
Sequence Databases:
Hepatitis B Virus
Database at DNA database of Japan
Viral
Genome resource at NCBI
Taxonomy:
International
Committee on Taxonomy of Viruses
HBV
Taxonomy report NCBI
Phylogenetic
Tree at the HBV sequence database (Japan)
Alignments search and repositories:
Hepatitis B Virus
Database at DNA database of Japan
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