N-myristoylation site

  • GAddTV (residues 27 - 32)
  • GGigGF (residues 48 - 53)
  • GCtlNF (residues 94 - 99)

Protein kinase C phosphorylation site

  • TiK (residues 12 - 14)

Casein kinase II phosphorylation site

  • TgaD (residues 26 - 29)
  • TvlE (residues 31 - 34)

Eukaryotic / viral aspartyl protease active site:

  • ALLDTGADdTvL (residues 22 - 33)

Aspartyl protease - retroviral-type family profile:

  • KEALLDTGADDTVLEEMSLPGRWKPK--
    MIGGIGGFIKVRQYDQILIEICGHKAIG
    TVLVGPTPVNIIGRNL (residues 20 - 89)

Developed by:
Ryan Doherty
¹, Tulio de Oliveira¹, Siva Danaviah¹, Michelle Gordon¹, Chris Seebregts², and Sharon Cassol¹.
Molecular Virology and Bioinformatics Unit of Africa Centre for Health and Populations Studies Nelson R Mandela School of Medicine, University of Natal¹, and the Research Information Systems Division, South African Medical Research Council (MRC)².

Revised 16 of Sept 2003 - Copyright © 2003 Africa Centre - All Rights Reserved.