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Oxford HCV Automated Subtyping Tool (Version 1.0 Genotypes)

This tool uses phylogenetic methods to identify the subtype of query sequences. The recombination analysis compares your query sequences to a reference alignment of the 6 HCV genotypes. A version that compares your sequences against all HCV subtypes available here.

Note for batch analysis: The Oxford HCV subtype tool accepts up to 1000 sequences at a time.

 
Enter here your input data as FASTA format.

Choose an alternative server to server your sequences




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Developed by: Tulio de Oliveira, Marco Salemi, Oliver Pybus, Sabrina Almeida,  Andrew Rambaut.

Developed by the Evolutionary Biology Group at University of Oxford, UK. Department of Pathology, Immunology & Laboratory Medicine, University of Florida, Gainesville, USA. Biotechnology department, Universidade Federal do Rio Grande do Sul (UFRGS), Brazil.

Funded by the Marie Curie Fellowship, Royal Society and Wellcome Trust, UK.

Suggestions or problems on the program please contact:  Dr Tulio de Oliveira.