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Oxford HCV Automated Subtyping Tool (Version 1.0 Subtypes)

This tool uses phylogenetic methods to identify the subtype of query sequences. The recombination analysis is done only with HCV Subtypes. 

Warning! These results should be interpreted with caution. Current sampling of HCV subtype diversity is incomplete, which may lead to false identification of recombination events.

A more reliable version for testing recombination with HCV genotypes is available here

Enter here your input data as FASTA format.

Choose an alternative server mirror to subtype your sequences




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Developed by: Tulio de Oliveira, Marco Salemi, Oliver Pybus, Sabrina Almeida,  Andrew Rambaut.

Developed by the Evolutionary Biology Group at University of Oxford, UK. Department of Pathology, Immunology & Laboratory Medicine, University of Florida, Gainesville, USA. Biotechnology department, Universidade Federal do Rio Grande do Sul (UFRGS), Brazil.

Funded by the Marie Curie Fellowship, Royal Society and Wellcome Trust, UK.

Suggestions or problems on the program please contact:  Dr Tulio de Oliveira.